PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG060990.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 349aa    MW: 37422.5 Da    PI: 9.8797
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG060990.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH48.11.8e-15274299126
                       --S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                       +ktelC+ + +tG C+yGd+C+FaHg
  TRIDC1AG060990.1 274 FKTELCNKWEETGACPYGDQCQFAHG 299
                       79***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
GPAAAAAMHE APLHPAHPVP FGPRLPAFRD RRLCPPTADG PFFYGGCTPF VPSPRPSPLG  60
RGSPPFTPSP RSSSPGTPWS SSASSSSGSR VDAAATEHGL RMARLALQYQ DFANRYQLCL  120
SHLADAAREA AAIRHDNSGL RLANNVLASR FAVLGGNQAS AVALAEQLHR LHLGQAQVVP  180
APPPMPRARP ASPAEKHAAM PKSISIRSNG YLKMDRNGKH RVTAPVNVGS QQRVFVGVDG  240
AKAEEHQGRG GEKGGQVATA ADGLQFEVYS QGMFKTELCN KWEETGACPY GDQCQFAHGI  300
AELRPIIRHP RYKTQVCRMV IGGAICPYGH RCHFRHSITP ADYIPLLHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.12e-57C3H family protein