PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG060530.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 282aa    MW: 30826.6 Da    PI: 10.0449
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG060530.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.5e-19103152356
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       y+GVr++  +g+WvAeIr p +   r r++lg+++++e Aa a+++a+ +l+ge
  TRIDC1AG060530.2 103 YRGVRQRQ-WGKWVAEIRLPQN---RVRVWLGTYDSPETAAHAYDRAAYRLRGE 152
                       9****999.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MDASFRTLSP SSFTGEVRSA VSSLLLSPGG ATALDTVFSH LPPPVTIPPL GSSVYYRQSE  60
LLRSFAATQP HHHLAAAASS SSGYALPFPG AASQDAAAGR KMYRGVRQRQ WGKWVAEIRL  120
PQNRVRVWLG TYDSPETAAH AYDRAAYRLR GEYARLNFPG VMDGADDARF PDALRQLRDA  180
VDAKIQAIRV RMARKRARAR RLREEAKQQQ NSNTQRAASA EAAPAPPTAP RPVVSESATT  240
SETTTTSSYG SPEGVLSSAD FECSLQRMPS FDPELIWEML NF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1193199ARKRARA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.14e-34ERF family protein