PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG060500.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 163aa MW: 17602.4 Da PI: 4.7834 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 85 | 7e-27 | 13 | 74 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDg +WrKYGqK++ g+++pr+Y+rCt++ gC+++k+v+r+a dp +++++Y+g H++ TRIDC1AG060500.1 13 LDDGLSWRKYGQKDILGAPYPRAYFRCTHRhsqGCQATKQVQRAAADPLLFDVVYHGAHTCA 74 58***************************98999**************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
QVRVASMQDL GSLDDGLSWR KYGQKDILGA PYPRAYFRCT HRHSQGCQAT KQVQRAAADP 60 LLFDVVYHGA HTCAQATAVL VGTDQQPPAS LGQEQQQQQS SPAEASEGMQ WPAEPFTPPS 120 FPSSPAGCYT PGNSWCQLAG NYGYAAGGGL GADMDFDELF WNM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24110.1 | 6e-29 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG060500.1 |