PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG056620.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 279aa MW: 32413 Da PI: 9.9219

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG056620.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	40.5	9.2e-13	1	120	10	90
FAR1 10 vGFsvrkskskks.....krngeitkrtfvCskegkreeekkk...................................tekerrtraetrtgC 62 +GF +r+ +sk+s ++++ + r f C + k+ +++ +++rr++ +r +C TRIDC1AG056620.1 1 MGFGTRIVTSKHSrknslEQKRILIYRVFECIHSRKDPSKNVGgsisdgaatnqsddvdmsyasnkkspskqagiymdVSDKRRRNRLERYDC 93 6999999888888555665666789999**9999888777799****************************989999999*** PP FAR1 63 kaklkvkkekdgkwevtkleleHnHela 90 ka++ v+++ dg w+vt +e +H+H+l+ TRIDC1AG056620.1 94 KARMGVSLK-DGSWVVTVFEADHTHQLM 120 *****.**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MGFGTRIVTS KHSRKNSLEQ KRILIYRVFE CIHSRKDPSK NVGGSISDGA ATNQSDDVDM 60 SYASNKKSPS KQAGIYMDVS DKRRRNRLER YDCKARMGVS LKDGSWVVTV FEADHTHQLM 120 LQRERRRFCR SHRKIPDADM QYITLMHYRN ISTANMMGLL GDARCCDPRS LPYVNTDVTN 180 ARAKLRRGLS ERDLELTIEY FERRQVENPN FFFSKLEEDR AVRALFWVDG RTRALYPKYK 240 DCVFFDTIFC TNRYNLPFAV IVGINNHTHT VCLGVHFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	3e-25	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG056620.1