PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG055260.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 321aa    MW: 36507.6 Da    PI: 4.8222
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG055260.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.61.1e-345962102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+y+++ed+++++++sw + gn+fvv+d++ fa+ +Lp+ Fkhsnf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+++ll
  TRIDC1AG055260.5   5 FLTKTYDLVEDPATDQVVSWGRAGNTFVVWDPHVFAEALLPRLFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQRHLL 88 
                       9****************************************************************999.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                       ++ikr+k 
  TRIDC1AG055260.5  89 KTIKRRKP 96 
                       *****985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
GPPPFLTKTY DLVEDPATDQ VVSWGRAGNT FVVWDPHVFA EALLPRLFKH SNFSSFVRQL  60
NTYGFRKVDP DRWEFANEGF LRGQRHLLKT IKRRKPPSNA PSSQQQALTS CLEVGEFGFE  120
EEIDRLKRDK NLLITEVVKL RQEQQATKDN VQAMEGRLRA AEQRQAQMMG FLARAMRNPH  180
FFQQLVQKQD KRKELEDAIS KKRRRPIDNA PFYGSGATTS QSEQLDSQFL FDSGVLSEPG  240
MNGMENLAQN IQELGQGKTD EEKKDEANGQ LDINSDFWAE LFSDDFGDED GSGLSELEGR  300
RPEDIDELGQ QLGYLSSTSP Q
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18894LKTIKRR
2191205KRKELEDAISKKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-103HSF family protein