PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG054870.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 332aa MW: 36449.1 Da PI: 6.9148

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG054870.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.1	2.7e-17	168	222	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Le F+++++++ e++ LA++l+L rqV vWFqNrRa+ k TRIDC1AG054870.1 168 RKKLRLSKEQSAFLEGSFKEHSTLTLEQKSCLANRLSLRPRQVEVWFQNRRARTK 222 678899***********************************************98 PP
2	HD-ZIP_I/II	116	2.3e-37	168	256	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rlskeq+++LE sF+e+++L+ e+K+ la++L l+prqv+vWFqnrRARtk+kq+E d+e+Lkr+++al++en++L++ev+eLr+ TRIDC1AG054870.1 168 RKKLRLSKEQSAFLEGSFKEHSTLTLEQKSCLANRLSLRPRQVEVWFQNRRARTKLKQTEADCERLKRCCEALARENRKLQREVAELRA 256 69*************************************************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
ADHFYICGTC YLFPLRLITP RPLPFLDMEL ELSLGDLPAP VKASTMPAPA TCQGEDHDDL 60 ALGLRVTATQ RADQDNQRIS IETAEGEEDS DEACRELPVR ASPFRQASSQ TASANSRGFD 120 VNAAVPVDGR ASIVRSLSPP SMHMEVPVTQ GVDEEASEDE DNGGGRVRKK LRLSKEQSAF 180 LEGSFKEHST LTLEQKSCLA NRLSLRPRQV EVWFQNRRAR TKLKQTEADC ERLKRCCEAL 240 ARENRKLQRE VAELRASRAP YPLYNLNHHL SGFSTVLPAG SSCDATTRST VSAVSSPGPS 300 PVSTLFPGRP HFGPFTVSHP VLPLCRQPSA TL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	166	172	RVRKKLR
2	217	225	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	4e-47	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG054870.1