PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG054800.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 250aa MW: 28683.4 Da PI: 10.0329 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.5 | 2.6e-17 | 23 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +lv++v+q+G + W+ a++++ R +kqc++rw+++l TRIDC1AG054800.1 23 KGQWTPEEDRKLVKLVEQFGLRKWSQMAQMLP-ARVGKQCRERWHNHL 69 799*****************************.*************97 PP | |||||||
2 | Myb_DNA-binding | 40.3 | 7.2e-13 | 75 | 116 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W++eEd l++ +k+ G++ W+ Ia++++ gRt+ +k++w+ TRIDC1AG054800.1 75 KDTWSEEEDMVLIQTHKEVGNK-WAEIAKRLP-GRTE-TIKNHWN 116 679*******************.*********.***9.9*****8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MSGRFIPRRK ASSKAVKKAN VVKGQWTPEE DRKLVKLVEQ FGLRKWSQMA QMLPARVGKQ 60 CRERWHNHLR PNIKKDTWSE EEDMVLIQTH KEVGNKWAEI AKRLPGRTET IKNHWNATKR 120 KQSARRRARS RVKNPKSGTL LQNYIKSLGI ACSKGIAPQD PKESPLSASS PAPPTQNRAH 180 VNDNWPESNP SNIMVTQGIF STDDRQIHSC EEILVPTSDD FSVDMFDGLF NAEEVQYQAY 240 NIDDDVDMDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 9e-56 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG054800.1 |