PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG053760.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 296aa MW: 32470.3 Da PI: 5.9928

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG053760.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51	3.4e-16	18	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+ + ++G g+W++++r g++R++k+c++rw++yl TRIDC1AG053760.2 18 KGLWSPEEDEKLYSHILRYGVGCWSSVPRLAGLHRCGKSCRLRWLNYL 65 678*******************************************97 PP
2	Myb_DNA-binding	52.3	1.3e-16	71	114	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +++eE++ +v +++ lG++ W+ Ia++++ gRt++++k++w++ TRIDC1AG053760.2 71 RGTFSQEEEDHIVALHQILGNR-WSQIASHLP-GRTDNEIKNFWNS 114 899*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MGRPTSGGVQ MQQPKLRKGL WSPEEDEKLY SHILRYGVGC WSSVPRLAGL HRCGKSCRLR 60 WLNYLRPDLK RGTFSQEEED HIVALHQILG NRWSQIASHL PGRTDNEIKN FWNSCIKKKL 120 RKQGIDPATH KPMAAGMITA ATAALPDAEA VDRKPLAAAA DGSLAPKQSP EFDPFPVCAD 180 YGGGFAGDLG AANATALYVQ FGDCKDGAHG DTGFGAADYS CVLDVSENLG YGESSSNSSN 240 WNYGGEVGSV LDGEVLHWAK AEMERQHDEP PEHKFALPCQ EQSLLANFEF NLEQYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	1e-68	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG053760.2