PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG053750.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 291aa MW: 31639.2 Da PI: 6.2351 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.3 | 3.1e-17 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ + ++G g+W++++r g++R++k+c++rw +yl TRIDC1AG053750.3 16 KGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAGLNRCGKSCRLRWINYL 63 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.1 | 6.4e-16 | 69 | 112 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++ +v +++ lG++ W+ Ia++++ gRt++++k++w++ TRIDC1AG053750.3 69 RGCFSQQEEDNIVALHQILGNR-WSQIASHLP-GRTDNEIKNFWNS 112 899*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
MGRPSSGGVG QPKLRKGLWS PEEDEKLYNH IIRHGVGCWS SVPRLAGLNR CGKSCRLRWI 60 NYLRPDLKRG CFSQQEEDNI VALHQILGNR WSQIASHLPG RTDNEIKNFW NSCIKKKLRQ 120 QGIDPATHKP MGAADTATAA LPDAEDEDRK PLAAAADSSL APKQPAVFDP FPVCADYGAE 180 FADGLGTANA AALYGQFGCG KEGADEDAGF GAADYSCVLD VSENLGYGES SSNSSNWNYG 240 GEVGSVLDGE VPHWGKAEME QQHTPLEHKS SLPCQEQSLL YRTAKNHQKA N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26660.1 | 7e-70 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG053750.3 |