PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG053340.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 152aa MW: 17063.5 Da PI: 8.8461 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 28.6 | 4.6e-09 | 98 | 142 | 1 | 47 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 +fY++YA++v F vr ++k + n+ +++f C keg+r e+ TRIDC1AG053340.1 98 EFYRTYAHNVRFGVRLGQQKVT--NNVLQWKRFLCAKEGFRPEKGMV 142 6****************99888..8889*************998765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 152 aa Download sequence |
MEGSSATSPL EEPTFRIIAN CVPTLSAVES VNSAENQVFS DATSFGEINS PMLLIDDSST 60 PKKKQSFSQE GSLYKPQCHE ELKPKVGMLF DDIGSVLEFY RTYAHNVRFG VRLGQQKVTN 120 NVLQWKRFLC AKEGFRPEKG MVVVDPSKKR RK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 148 | 152 | KKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18960.1 | 2e-07 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG053340.1 |