PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG052640.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 364aa    MW: 40779.5 Da    PI: 6.1202
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG052640.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.91.5e-10201244447
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       WT +E++l++++   +G g+Wk I++++ +++t  q+ s+ qky
  TRIDC1AG052640.3 201 WTIDEHKLFLRGLGVYGRGDWKNISKHFVTTKTHVQVSSHAQKY 244
                       *******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
SYYPQVCSFD LSSLMDPLVN QGWTSSEEEE ARSLIVGHNS HTIMYDDKNK RHNNIVDALH  60
ELFPSKTRQQ VTDLYVNLAV ESYMMHSREE RHVVGGNTHS VGPINLVNNN FGVSGQEIGA  120
SNICGINTMG DHVIDGYAVR EEEEAATMND NELIFGHALE DTRITETKEA PLMVDKNKMQ  180
ILENNITSDQ LVVPPRQGRF WTIDEHKLFL RGLGVYGRGD WKNISKHFVT TKTHVQVSSH  240
AQKYFRRLHK RASFGTQRYS INDVGLHDED PWSMNNSSGP LQMLGSTGLN NETSFGLQAP  300
ISSSIVMNNQ PQLWPPFIYS HQINQQPVWS EHHMLGSTGV VTDGMGNSAP PCQQGSTCFP  360
LGNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-18MYB family protein