PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG052640.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 274aa MW: 31022.8 Da PI: 7.1969 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.5 | 1e-10 | 111 | 154 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 WT +E++l++++ +G g+Wk I++++ +++t q+ s+ qky TRIDC1AG052640.2 111 WTIDEHKLFLRGLGVYGRGDWKNISKHFVTTKTHVQVSSHAQKY 154 *******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
SYYPQVCSFD LSSLMDPLVN QGWTSSEEEE ARSLIVGHNS HTIMYDDKNK RHNNIVDALH 60 ELFPSKTRQQ DTRITETKEA PLMVDKNKMQ ILENNITSDQ LVVPPRQGRF WTIDEHKLFL 120 RGLGVYGRGD WKNISKHFVT TKTHVQVSSH AQKYFRRLHK RASFGTQRYS INDVGLHDED 180 PWSMNNSSGP LQMLGSTGLN NETSFGLQAP ISSSIVMNNQ PQLWPPFIYS HQINQQPVWS 240 EHHMLGSTGV VTDGMGNSAP PCQQGSTCFP LGNV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 7e-19 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG052640.2 |