PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG052640.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 318aa MW: 35754.9 Da PI: 6.1008

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG052640.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.1	1.3e-10	155	198	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 WT +E++l++++ +G g+Wk I++++ +++t q+ s+ qky TRIDC1AG052640.1 155 WTIDEHKLFLRGLGVYGRGDWKNISKHFVTTKTHVQVSSHAQKY 198 *******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
SYYPQVCSFD LSSLMDPLVN QGWTSSEEEE ARSLIVGHNS HTIMYDDKNK RHNNIVDALH 60 ELFPSKTRQQ EIGASNICGI NTMGDHVIDG YAVREEEEAA TMNDNELIFG HALEDTRITE 120 TKEAPLMVDK NKMQILENNI TSDQLVVPPR QGRFWTIDEH KLFLRGLGVY GRGDWKNISK 180 HFVTTKTHVQ VSSHAQKYFR RLHKRASFGT QRYSINDVGL HDEDPWSMNN SSGPLQMLGS 240 TGLNNETSFG LQAPISSSIV MNNQPQLWPP FIYSHQINQQ PVWSEHHMLG STGVVTDGMG 300 NSAPPCQQGS TCFPLGNV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	9e-19	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG052640.1