PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG052370.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NF-YC | ||||||||
Protein Properties | Length: 130aa MW: 13652.5 Da PI: 8.7912 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 88.4 | 7e-28 | 21 | 109 | 18 | 97 |
NF-YC 18 nhelPlarikkilkade.d........vkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 h+lPlarikki++ d +mis+eaPvl+s+acelf+ elt +w + e +rrt++ d+aaav t++fdflvd+v TRIDC1AG052370.1 21 PHALPLARIKKIMRRSArDgsggdgagARMISCEAPVLFSRACELFVAELTRAAWDATLEGRRRTVHAEDVAAAVRDTNVFDFLVDVVK 109 599**********9643122222233389*********************************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence |
MRLPSPYSGV FRGGSTARTG PHALPLARIK KIMRRSARDG SGGDGAGARM ISCEAPVLFS 60 RACELFVAEL TRAAWDATLE GRRRTVHAED VAAAVRDTNV FDFLVDVVKA RPSDDGVNAG 120 DGEGGVAPAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 2e-26 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG052370.1 |