PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG052220.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NF-YC | ||||||||
Protein Properties | Length: 135aa MW: 13885.7 Da PI: 9.2321 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 87.9 | 1e-27 | 21 | 109 | 18 | 97 |
NF-YC 18 nhelPlarikkilkade.d........vkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 h+lPlarikki+k d +mis eaPv++s+acelf+ elt +w + e +rrt++ d+aaav td fdflvd+v TRIDC1AG052220.1 21 PHALPLARIKKIMKRSAgDgsggygagARMISGEAPVVFSRACELFVAELTQAAWAATLEGRRRTVHAEDVAAAVRDTDLFDFLVDVVK 109 599***********753212222333389*********************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MRISRPYSGV SRSGATARTG PHALPLARIK KIMKRSAGDG SGGYGAGARM ISGEAPVVFS 60 RACELFVAEL TQAAWAATLE GRRRTVHAED VAAAVRDTDL FDFLVDVVKP RPGDDGVGDG 120 VGLAPAAGVH GGALD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 4e-21 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG052220.1 |