PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG051010.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 265aa    MW: 28719.1 Da    PI: 6.0733
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG051010.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.88e-08109134326
                       S---SGGGGTS...--TTTTT-SS-SS CS
           zf-CCCH   3 telCrffartG...tCkyGdrCkFaHg 26 
                        e+C++f+r      C++G++C+FaHg
  TRIDC1AG051010.2 109 GEPCPDFRR-RpgaACPRGSSCPFAHG 134
                       589****99.558*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
SHGHEHGLLL DPAALAYSWA AEPEFPPQLL AALGEYLSSS AAAAGASHGD HQSAVDTDAD  60
AEADDEFMMY EFKVRRCARA RSHDWTACPY AHPGEAARRR DPRRVAYAGE PCPDFRRRPG  120
AACPRGSSCP FAHGTFELWL HPSRYRTRPC RAGPACRRRV CFFAHAAGEL RLASHHKGPG  180
PDSPPALSPK STLTALWESP PVSPVEGRMR WLDAIDDAAA ADAEVWEIML AMQQLSFANA  240
APSGTLPAVT EDDGPDLGWV SELVM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.11e-42C3H family protein