PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG049810.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

VOZ

Protein Properties

Length: 499aa MW: 54626 Da PI: 4.8579

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG049810.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	411.2	1.9e-126	166	383	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna 92 p+ps++lgpkcalwdc rp++gse++qdyc+ +ha lal + gl+gt+pv+rp+gidlkdg+lf+al akvqgk+vgip+cegaat+kspwna TRIDC1AG049810.6 166 PSPSQYLGPKCALWDCGRPVRGSEECQDYCNPYHAGLALSDdGLLGTRPVMRPRGIDLKDGPLFDALCAKVQGKNVGIPVCEGAATSKSPWNA 258 89***********************************87699********************************************* PP VOZ 93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrl 185 elfdlsllege++rewlffd+prrafesgnrkqrslpdy+grgwhesrkqvmk+fgglk+syymdpqpss++ewhl+eyein++++lalyrl TRIDC1AG049810.6 259 HELFDLSLLEGESLREWLFFDRPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKKSYYMDPQPSSNYEWHLFEYEINDSNTLALYRL 351 ***************************************************************************************** PP VOZ 186 elklvdekksakgkvskdsladlqkklgrlta 217 e+k +d k+s+k+k+ ++sl+++q+++++l+a TRIDC1AG049810.6 352 EFKASDPKRSVKSKLGSSSLNEIQQQMVKLSA 383 ****************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
QNSLGNNQGA ADPPSETLRL LQLAIEEEDD ATSKLAQPMQ PSRQDGHQNL NPGLQVHGGT 60 VDGGADASQQ SMGHGMQGEL ADVANALFSD QMYYIDHELS IDDFLHGSNP DGLNNLQGTG 120 QPEHQQFNLP LDLQHSNNSY ADANNSVQST GDVFFHMSDL LTTVGPSPSQ YLGPKCALWD 180 CGRPVRGSEE CQDYCNPYHA GLALSDDGLL GTRPVMRPRG IDLKDGPLFD ALCAKVQGKN 240 VGIPVCEGAA TSKSPWNAHE LFDLSLLEGE SLREWLFFDR PRRAFESGNR KQRSLPDYNG 300 RGWHESRKQV MKDFGGLKKS YYMDPQPSSN YEWHLFEYEI NDSNTLALYR LEFKASDPKR 360 SVKSKLGSSS LNEIQQQMVK LSANSPVDNK RGARSKTKAS QKDTNANAYP ALKATNQAGA 420 SNAYEAVPLN IPNQASAPSA YQTVAPNIPN QDSTSNAYED ASQVDPMSYL NENVVYGPHL 480 PYGYPDGKGD FYWNPSGGA

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

QNSLGNNQGA ADPPSETLRL LQLAIEEEDD ATSKLAQPMQ PSRQDGHQNL NPGLQVHGGT  60
VDGGADASQQ SMGHGMQGEL ADVANALFSD QMYYIDHELS IDDFLHGSNP DGLNNLQGTG  120
QPEHQQFNLP LDLQHSNNSY ADANNSVQST GDVFFHMSDL LTTVGPSPSQ YLGPKCALWD  180
CGRPVRGSEE CQDYCNPYHA GLALSDDGLL GTRPVMRPRG IDLKDGPLFD ALCAKVQGKN  240
VGIPVCEGAA TSKSPWNAHE LFDLSLLEGE SLREWLFFDR PRRAFESGNR KQRSLPDYNG  300
RGWHESRKQV MKDFGGLKKS YYMDPQPSSN YEWHLFEYEI NDSNTLALYR LEFKASDPKR  360
SVKSKLGSSS LNEIQQQMVK LSANSPVDNK RGARSKTKAS QKDTNANAYP ALKATNQAGA  420
SNAYEAVPLN IPNQASAPSA YQTVAPNIPN QDSTSNAYED ASQVDPMSYL NENVVYGPHL  480
PYGYPDGKGD FYWNPSGGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-111	VOZ family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG049810.6