PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG048840.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 197aa    MW: 21148.7 Da    PI: 8.7341
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG048840.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.6e-174493355
               AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++GVr ++ +g+++AeIrd + ng   r++lg+f ++e Aa a+++a+ +++g
  TRIDC1AG048840.1 44 FRGVRKRP-WGKYAAEIRDSTRNG--VRVWLGTFESPEAAALAYDQAAFAMRG 93
                      8*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
TNDADEKLPR NMLSQHQDGS AHGTAAAPLK QEPTDAGVDA GRAFRGVRKR PWGKYAAEIR  60
DSTRNGVRVW LGTFESPEAA ALAYDQAAFA MRGGAAVLNF PADQVRRSLE GAGEDVRGRA  120
HGVSPVLALK RRHSMRSRKA TASLPCRKIA KAARGRPEGV VMELEDLGAE YLEELLGAAD  180
DMTASASDSW CSSHHSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.15e-33ERF family protein