PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG046950.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 362aa    MW: 41441.5 Da    PI: 6.2087
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG046950.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.41.4e-07212254145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       r +WT+ + +l++++ +q+G++ ++ I + ++  +++ q++ ++ 
  TRIDC1AG046950.9 212 RAKWTKSDTDLFYQGLQQFGSD-FAMIQQLFP-DKSRDQVRQKFK 254
                       569*******************.*********.********9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MKLRSRTEIQ KVGLSEHIVD DHLDEDFVEP SAAEQNNDSS DENTAGGKQK APRKSRKKDP  60
NKEPLRGSKR TSTKSTSEKS QPNQQKNKSE VSSRGCKRAL KDTMTEQPEK NLTHRIRQKR  120
AQEVQTLLQK PDHEIDRMKL SVTHLRLLQE ARERIQSKTP SGPSSSNQSS RFGDTDDFDP  180
FGDNYDNDRT ENQALESATK LNYHSYMDKK TRAKWTKSDT DLFYQGLQQF GSDFAMIQQL  240
FPDKSRDQVR QKFKSEDKKH PMQVHDAILH RSRDNLYLKQ VMKQLNIEDS LKDINITQKQ  300
EVASTEGNTG NDVISETNTF SVENVSNLSD EEMGTHQSEV KEGEDVAAGN ADDVDLDVFD  360
WY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.23e-27MYB_related family protein