PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG046950.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 804aa MW: 88829.8 Da PI: 4.7831

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG046950.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.9	4e-07	654	696	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +WT+ + +l++++ +q+G++ ++ I + ++ +++ q++ ++ TRIDC1AG046950.8 654 RAKWTKSDTDLFYQGLQQFGSD-FAMIQQLFP-DKSRDQVRQKFK 696 569*****************.*****.******9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 804 aa Download sequence
DFGRSKQLPG GLKGGLDMID DEANFGDITD APAEAEAAAK FHPNKLRGKL RKKSVPSRSV 60 VPNRTVETSD EKALALSQDN LSQGLATNQE IASSAVHGSE TIGGAEVCGG TIYTPSDDVL 120 AVSSVDRVSQ NDDPHDDPSE VVTLQESLVV SDTQASSTHP TSKTVDDLAD FGELFDTHSE 180 EENAAKSKLK IKVKLSKAAS KSRKTGQKKA ASTVDVVSQN KEDGNDDVRG CNDEQVQAQH 240 EEHVQTSDSQ PPLGTDDGTV DNFVNHNRIL EEPGPEETAA KLCPKSQRKP GRASSKAVGT 300 SDDYAAANLK DINASVDIDS QDGLINPHTD DTQPIFGEPS AEAAATFLLD LGKKKSKGKS 360 VTFVLPDDYE GVAATDTNHN DIGSDENLNT LPQQAPQKHC LTEEHSDDQE YTDRESQYYE 420 GERSDHGVEQ QSKLDVGKQE LSMKLRSRTE IQKVGLSEHI VDDHLDEDFV EPSAAEQNND 480 SSDENTAGGK QKAPRKSRKK DPNKEPLRGS KRTSTKSTSE KSQPNQQKNK SEVSSRGCKR 540 ALKDTMTEQP EKNLTHRIRQ KRAQEVQTLL QKPDHEIDRM KLSVTHLRLL QEARERIQSK 600 TPSGPSSSNQ SSRFGDTDDF DPFGDNYDND RTENQALESA TKLNYHSYMD KKTRAKWTKS 660 DTDLFYQGLQ QFGSDFAMIQ QLFPDKSRDQ VRQKFKSEDK KHPMQVHDAI LHRSRDNLYL 720 KQVMKQLNIE DSLKDINITQ KQEVASTEGN TGNDVISETN TFSVENVSNL SDEEMGTHQS 780 EVKEGEDVAA GNADDVDLDV FDWY

Sequence ? help Back to Top

Protein Sequence Length: 804 aa Download sequence

DFGRSKQLPG GLKGGLDMID DEANFGDITD APAEAEAAAK FHPNKLRGKL RKKSVPSRSV  60
VPNRTVETSD EKALALSQDN LSQGLATNQE IASSAVHGSE TIGGAEVCGG TIYTPSDDVL  120
AVSSVDRVSQ NDDPHDDPSE VVTLQESLVV SDTQASSTHP TSKTVDDLAD FGELFDTHSE  180
EENAAKSKLK IKVKLSKAAS KSRKTGQKKA ASTVDVVSQN KEDGNDDVRG CNDEQVQAQH  240
EEHVQTSDSQ PPLGTDDGTV DNFVNHNRIL EEPGPEETAA KLCPKSQRKP GRASSKAVGT  300
SDDYAAANLK DINASVDIDS QDGLINPHTD DTQPIFGEPS AEAAATFLLD LGKKKSKGKS  360
VTFVLPDDYE GVAATDTNHN DIGSDENLNT LPQQAPQKHC LTEEHSDDQE YTDRESQYYE  420
GERSDHGVEQ QSKLDVGKQE LSMKLRSRTE IQKVGLSEHI VDDHLDEDFV EPSAAEQNND  480
SSDENTAGGK QKAPRKSRKK DPNKEPLRGS KRTSTKSTSE KSQPNQQKNK SEVSSRGCKR  540
ALKDTMTEQP EKNLTHRIRQ KRAQEVQTLL QKPDHEIDRM KLSVTHLRLL QEARERIQSK  600
TPSGPSSSNQ SSRFGDTDDF DPFGDNYDND RTENQALESA TKLNYHSYMD KKTRAKWTKS  660
DTDLFYQGLQ QFGSDFAMIQ QLFPDKSRDQ VRQKFKSEDK KHPMQVHDAI LHRSRDNLYL  720
KQVMKQLNIE DSLKDINITQ KQEVASTEGN TGNDVISETN TFSVENVSNL SDEEMGTHQS  780
EVKEGEDVAA GNADDVDLDV FDWY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	2e-26	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG046950.8