PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG046950.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 852aa MW: 93877.6 Da PI: 5.0544

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG046950.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.9	4.2e-07	702	744	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +WT+ + +l++++ +q+G++ ++ I + ++ +++ q++ ++ TRIDC1AG046950.2 702 RAKWTKSDTDLFYQGLQQFGSD-FAMIQQLFP-DKSRDQVRQKFK 744 569*****************.*****.******9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 852 aa Download sequence
RRPTQSVLLR RCPPPLNRAA GNLGLFKEGP KGSSSPSPGK HLRGVTSDFG RSKQLPGGLK 60 GGLDMIDDEA NFGDITDAPA EAEAAAKFHP NKLRGKLRKK SVPSRSVVPN RTVETSDEKA 120 LALSQDNLSQ GLATNQEIAS SAVHGSETIG GAEVCGGTIY TPSDDVLAVS SVDRVSQNDD 180 PHDDPSEVVT LQESLVVSDT QASSTHPTSK TVDDLADFGE LFDTHSEEEN AAKSKLKIKV 240 KLSKAASKSR KTGQKKAAST VDVVSQNKED GNDDVRGCND EQVQAQHEEH VQTSDSQPPL 300 GTDDGTVDNF VNHNRILEEP GPEETAAKLC PKSQRKPGRA SSKAVGTSDD YAAANLKDIN 360 ASVDIDSQDG LINPHTDDTQ PIFGEPSAEA AATFLLDLGK KKSKGKSVTF VLPDDYEGVA 420 ATDTNHNDIG SDENLNTLPQ QAPQKHCLTE EHSDDQEYTD RESQYYEGER SDHGVEQQSK 480 LDVGKQELSM KLRSRTEIQK VGLSEHIVDD HLDEDFVEPS AAEQNNDSSD ENTAGGKQKA 540 PRKSRKKDPN KEPLRGSKRT STKSTSEKSQ PNQQKNKSEV SSRGCKRALK DTMTEQPEKN 600 LTHRIRQKRA QEVQTLLQKP DHEIDRMKLS VTHLRLLQEA RERIQSKTPS GPSSSNQSSS 660 RFGDTDDFDP FGDNYDNDRT ENQALESATK LNYHSYMDKK TRAKWTKSDT DLFYQGLQQF 720 GSDFAMIQQL FPDKSRDQVR QKFKSEDKKH PMQVHDAILH RSRDNLYLKQ VMKQLNIEDS 780 LKDINITQKQ EVASTEGNTG NDVISETNTF SVENVSNLSD EEMGTHQSEV KEGEDVAAGN 840 ADDVDLDVFD WY

Sequence ? help Back to Top

Protein Sequence Length: 852 aa Download sequence

RRPTQSVLLR RCPPPLNRAA GNLGLFKEGP KGSSSPSPGK HLRGVTSDFG RSKQLPGGLK  60
GGLDMIDDEA NFGDITDAPA EAEAAAKFHP NKLRGKLRKK SVPSRSVVPN RTVETSDEKA  120
LALSQDNLSQ GLATNQEIAS SAVHGSETIG GAEVCGGTIY TPSDDVLAVS SVDRVSQNDD  180
PHDDPSEVVT LQESLVVSDT QASSTHPTSK TVDDLADFGE LFDTHSEEEN AAKSKLKIKV  240
KLSKAASKSR KTGQKKAAST VDVVSQNKED GNDDVRGCND EQVQAQHEEH VQTSDSQPPL  300
GTDDGTVDNF VNHNRILEEP GPEETAAKLC PKSQRKPGRA SSKAVGTSDD YAAANLKDIN  360
ASVDIDSQDG LINPHTDDTQ PIFGEPSAEA AATFLLDLGK KKSKGKSVTF VLPDDYEGVA  420
ATDTNHNDIG SDENLNTLPQ QAPQKHCLTE EHSDDQEYTD RESQYYEGER SDHGVEQQSK  480
LDVGKQELSM KLRSRTEIQK VGLSEHIVDD HLDEDFVEPS AAEQNNDSSD ENTAGGKQKA  540
PRKSRKKDPN KEPLRGSKRT STKSTSEKSQ PNQQKNKSEV SSRGCKRALK DTMTEQPEKN  600
LTHRIRQKRA QEVQTLLQKP DHEIDRMKLS VTHLRLLQEA RERIQSKTPS GPSSSNQSSS  660
RFGDTDDFDP FGDNYDNDRT ENQALESATK LNYHSYMDKK TRAKWTKSDT DLFYQGLQQF  720
GSDFAMIQQL FPDKSRDQVR QKFKSEDKKH PMQVHDAILH RSRDNLYLKQ VMKQLNIEDS  780
LKDINITQKQ EVASTEGNTG NDVISETNTF SVENVSNLSD EEMGTHQSEV KEGEDVAAGN  840
ADDVDLDVFD WY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	4e-27	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG046950.2