PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG046950.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 830aa MW: 91422.7 Da PI: 4.8917

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG046950.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.9	4.1e-07	680	722	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +WT+ + +l++++ +q+G++ ++ I + ++ +++ q++ ++ TRIDC1AG046950.10 680 RAKWTKSDTDLFYQGLQQFGSD-FAMIQQLFP-DKSRDQVRQKFK 722 569*****************.*****.******9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 830 aa Download sequence
LGLFKEGPKG SSSPSPGKHL RGVTSDFGRS KQLPGGLKGG LDMIDDEANF GDITDAPAEA 60 EAAAKFHPNK LRGKLRKKSV PSRSVVPNRT VETSDEKALA LSQDNLSQGL ATNQEIASSA 120 VHGSETIGGA EVCGGTIYTP SDDVLAVSSV DRVSQNDDPH DDPSEVVTLQ ESLVVSDTQA 180 SSTHPTSKTV DDLADFGELF DTHSEEENAA KSKLKIKVKL SKAASKSRKT GQKKAASTVD 240 VVSQNKEDGN DDVRGCNDEQ VQAQHEEHVQ TSDSQPPLGT DDGTVDNFVN HNRILEEPGP 300 EETAAKLCPK SQRKPGRASS KAVGTSDDYA AANLKDINAS VDIDSQDGLI NPHTDDTQPI 360 FGEPSAEAAA TFLLDLGKKK SKGKSVTFVL PDDYEGVAAT DTNHNDIGSD ENLNTLPQQA 420 PQKHCLTEEH SDDQEYTDRE SQYYEGERSD HGVEQQSKLD VGKQELSMKL RSRTEIQKVG 480 LSEHIVDDHL DEDFVEPSAA EQNNDSSDEN TAGGKQKAPR KSRKKDPNKE PLRGSKRTST 540 KSTSEKSQPN QQKNKSEVSS RGCKRALKDT MTEQPEKNLT HRIRQKRAQE VQTLLQKPDH 600 EIDRMKLSVT HLRLLQEARE RIQSKTPSGP SSSNQSSSRF GDTDDFDPFG DNYDNDRTEN 660 QALESATKLN YHSYMDKKTR AKWTKSDTDL FYQGLQQFGS DFAMIQQLFP DKSRDQVRQK 720 FKSEDKKHPM QVHDAILHRS RDNLYLKQVM KQLNIEDSLK DINITQKQEV ASTEGNTGND 780 VISETNTFSV ENVSNLSDEE MGTHQSEVKE GEDVAAGNAD DVDLDVFDWY

Sequence ? help Back to Top

Protein Sequence Length: 830 aa Download sequence

LGLFKEGPKG SSSPSPGKHL RGVTSDFGRS KQLPGGLKGG LDMIDDEANF GDITDAPAEA  60
EAAAKFHPNK LRGKLRKKSV PSRSVVPNRT VETSDEKALA LSQDNLSQGL ATNQEIASSA  120
VHGSETIGGA EVCGGTIYTP SDDVLAVSSV DRVSQNDDPH DDPSEVVTLQ ESLVVSDTQA  180
SSTHPTSKTV DDLADFGELF DTHSEEENAA KSKLKIKVKL SKAASKSRKT GQKKAASTVD  240
VVSQNKEDGN DDVRGCNDEQ VQAQHEEHVQ TSDSQPPLGT DDGTVDNFVN HNRILEEPGP  300
EETAAKLCPK SQRKPGRASS KAVGTSDDYA AANLKDINAS VDIDSQDGLI NPHTDDTQPI  360
FGEPSAEAAA TFLLDLGKKK SKGKSVTFVL PDDYEGVAAT DTNHNDIGSD ENLNTLPQQA  420
PQKHCLTEEH SDDQEYTDRE SQYYEGERSD HGVEQQSKLD VGKQELSMKL RSRTEIQKVG  480
LSEHIVDDHL DEDFVEPSAA EQNNDSSDEN TAGGKQKAPR KSRKKDPNKE PLRGSKRTST  540
KSTSEKSQPN QQKNKSEVSS RGCKRALKDT MTEQPEKNLT HRIRQKRAQE VQTLLQKPDH  600
EIDRMKLSVT HLRLLQEARE RIQSKTPSGP SSSNQSSSRF GDTDDFDPFG DNYDNDRTEN  660
QALESATKLN YHSYMDKKTR AKWTKSDTDL FYQGLQQFGS DFAMIQQLFP DKSRDQVRQK  720
FKSEDKKHPM QVHDAILHRS RDNLYLKQVM KQLNIEDSLK DINITQKQEV ASTEGNTGND  780
VISETNTFSV ENVSNLSDEE MGTHQSEVKE GEDVAAGNAD DVDLDVFDWY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	4e-27	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG046950.10