PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG046950.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 851aa MW: 93790.5 Da PI: 5.0544

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG046950.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.9	4.2e-07	701	743	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +WT+ + +l++++ +q+G++ ++ I + ++ +++ q++ ++ TRIDC1AG046950.1 701 RAKWTKSDTDLFYQGLQQFGSD-FAMIQQLFP-DKSRDQVRQKFK 743 569*****************.*****.******9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 851 aa Download sequence
RRPTQSVLLR RCPPPLNRAA GNLGLFKEGP KGSSSPSPGK HLRGVTSDFG RSKQLPGGLK 60 GGLDMIDDEA NFGDITDAPA EAEAAAKFHP NKLRGKLRKK SVPSRSVVPN RTVETSDEKA 120 LALSQDNLSQ GLATNQEIAS SAVHGSETIG GAEVCGGTIY TPSDDVLAVS SVDRVSQNDD 180 PHDDPSEVVT LQESLVVSDT QASSTHPTSK TVDDLADFGE LFDTHSEEEN AAKSKLKIKV 240 KLSKAASKSR KTGQKKAAST VDVVSQNKED GNDDVRGCND EQVQAQHEEH VQTSDSQPPL 300 GTDDGTVDNF VNHNRILEEP GPEETAAKLC PKSQRKPGRA SSKAVGTSDD YAAANLKDIN 360 ASVDIDSQDG LINPHTDDTQ PIFGEPSAEA AATFLLDLGK KKSKGKSVTF VLPDDYEGVA 420 ATDTNHNDIG SDENLNTLPQ QAPQKHCLTE EHSDDQEYTD RESQYYEGER SDHGVEQQSK 480 LDVGKQELSM KLRSRTEIQK VGLSEHIVDD HLDEDFVEPS AAEQNNDSSD ENTAGGKQKA 540 PRKSRKKDPN KEPLRGSKRT STKSTSEKSQ PNQQKNKSEV SSRGCKRALK DTMTEQPEKN 600 LTHRIRQKRA QEVQTLLQKP DHEIDRMKLS VTHLRLLQEA RERIQSKTPS GPSSSNQSSR 660 FGDTDDFDPF GDNYDNDRTE NQALESATKL NYHSYMDKKT RAKWTKSDTD LFYQGLQQFG 720 SDFAMIQQLF PDKSRDQVRQ KFKSEDKKHP MQVHDAILHR SRDNLYLKQV MKQLNIEDSL 780 KDINITQKQE VASTEGNTGN DVISETNTFS VENVSNLSDE EMGTHQSEVK EGEDVAAGNA 840 DDVDLDVFDW Y

Sequence ? help Back to Top

Protein Sequence Length: 851 aa Download sequence

RRPTQSVLLR RCPPPLNRAA GNLGLFKEGP KGSSSPSPGK HLRGVTSDFG RSKQLPGGLK  60
GGLDMIDDEA NFGDITDAPA EAEAAAKFHP NKLRGKLRKK SVPSRSVVPN RTVETSDEKA  120
LALSQDNLSQ GLATNQEIAS SAVHGSETIG GAEVCGGTIY TPSDDVLAVS SVDRVSQNDD  180
PHDDPSEVVT LQESLVVSDT QASSTHPTSK TVDDLADFGE LFDTHSEEEN AAKSKLKIKV  240
KLSKAASKSR KTGQKKAAST VDVVSQNKED GNDDVRGCND EQVQAQHEEH VQTSDSQPPL  300
GTDDGTVDNF VNHNRILEEP GPEETAAKLC PKSQRKPGRA SSKAVGTSDD YAAANLKDIN  360
ASVDIDSQDG LINPHTDDTQ PIFGEPSAEA AATFLLDLGK KKSKGKSVTF VLPDDYEGVA  420
ATDTNHNDIG SDENLNTLPQ QAPQKHCLTE EHSDDQEYTD RESQYYEGER SDHGVEQQSK  480
LDVGKQELSM KLRSRTEIQK VGLSEHIVDD HLDEDFVEPS AAEQNNDSSD ENTAGGKQKA  540
PRKSRKKDPN KEPLRGSKRT STKSTSEKSQ PNQQKNKSEV SSRGCKRALK DTMTEQPEKN  600
LTHRIRQKRA QEVQTLLQKP DHEIDRMKLS VTHLRLLQEA RERIQSKTPS GPSSSNQSSR  660
FGDTDDFDPF GDNYDNDRTE NQALESATKL NYHSYMDKKT RAKWTKSDTD LFYQGLQQFG  720
SDFAMIQQLF PDKSRDQVRQ KFKSEDKKHP MQVHDAILHR SRDNLYLKQV MKQLNIEDSL  780
KDINITQKQE VASTEGNTGN DVISETNTFS VENVSNLSDE EMGTHQSEVK EGEDVAAGNA  840
DDVDLDVFDW Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	2e-26	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG046950.1