PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG046880.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 192aa    MW: 20726.4 Da    PI: 11.0987
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG046880.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.5e-193988255
               AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +y+GVr ++ +gr++AeIrd ++    ++r++lg+++ta +Aa a+++a+ +l+g
  TRIDC1AG046880.2 39 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTYDTAVDAALAYDRAAVALRG 88
                      69*******.**********883....5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
RGGVMQMLPE ARGHHRSGGG VGGGGAGAGG RADAAAQGHY RGVRKRPWGR YAAEIRDPWK  60
KTRVWLGTYD TAVDAALAYD RAAVALRGPK ARTNFAGGHL APHQQQQQAC LLRPRPPARP  120
FGGRLDVAHP SPWHFVYFPS RLQEFLAQPL PAHDGRRDAA PSLPSTLLEL RTGPSSCPQF  180
DLNEPPSLMF GS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.11e-19ERF family protein