PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG042700.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 168aa    MW: 18105.1 Da    PI: 8.7083
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG042700.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.0005785107123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++C  Cg  Fs    L  H+r+H
  TRIDC1AG042700.1  85 HECAVCGLEFSMGQALGGHMRRH 107
                       78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
GAEGARADAQ QLTPPATPGA DDRAATGSRR RPAGGGGDGD GGAFVCRTCS RRFPTFQALG  60
GHRTGHTRLQ ARQQRPVTRK PRPHHECAVC GLEFSMGQAL GGHMRRHKQV EPQPHVEEAL  120
GAVHMRRHKE ADAQPPLEEE VALAGHKQAD AQARVEEEEA PGGSMRWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.11e-19C2H2 family protein