PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG042470.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 509aa    MW: 56729.6 Da    PI: 6.6732
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG042470.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.61.2e-172874148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd+ +++ vk++G+  W+ Iar +  gR +kqc++rw+++l
  TRIDC1AG042470.8 28 KGPWTQEEDDTIIQKVKEHGPTKWSVIARSLH-GRIGKQCRERWHNHL 74
                      79******************************.*************97 PP
2Myb_DNA-binding59.95.5e-1980122145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       + +WT eE++ lvda++++G++ W+ Ia+ ++ gRt++++k++w+
  TRIDC1AG042470.8  80 KEAWTFEEEQVLVDAHRMHGNK-WAEIAKLLP-GRTDNSIKNHWN 122
                       579*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 509 aa     Download sequence    
DTAEFFPDRT EVQCLHRWQK VLDPELIKGP WTQEEDDTII QKVKEHGPTK WSVIARSLHG  60
RIGKQCRERW HNHLDPQIRK EAWTFEEEQV LVDAHRMHGN KWAEIAKLLP GRTDNSIKNH  120
WNSSVRKRLD EYDTGAARNV PVHVSHNDLK QPAIALPAEN YIDLNEVPNI SLRNHSGIVD  180
HSDPTHSPRV CSLKNIKGCS DFLSLSMPTA QPVTSCQASA ADDSAVALAI MGMKMDSGRD  240
KDIELNFVCQ KGLQINLSNE KGLEIDPVTA KPDGRESTLV KEAQSFGSLC YQIPKLEDID  300
LVRSPVLSRH HGSEHGVDGF QSPTGYATPS PTDGKQSDQL SVESILKSAA ENFPGTPSIL  360
RRRKRDKPTP SQDTDFKIDA NSDCFDTPKA NCTTYSPHSF KTAPFLSLGR LDDQQLPSVL  420
GKFDVSPTYR LRSKRMAVLK TVEKHLDFSA DAMDTCDMVG TLKSSCRNTE SINASSDISS  480
AHDRRINGHM IGLETLTSDF AYTTKLDAT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1361367RRRKRDK
2361368RRRKRDKP
3362368RRRKRDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02320.21e-73MYB family protein