PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG041460.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 237aa MW: 25726.7 Da PI: 8.1264 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.6 | 1.7e-14 | 85 | 129 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + k++G g+W+ I+r + Rt+ q+ s+ qky TRIDC1AG041460.2 85 PWTEEEHKLFLMGLKKYGRGDWRNISRNYVTSRTPTQVASHAQKY 129 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
VAALLPGKTV ADVMRQYDDL ENDVCFIEAG LVPFPHYNAN APASGFTLDW DGGGDLAFKR 60 SCYMAAGGNG KRGRGADQER KKGVPWTEEE HKLFLMGLKK YGRGDWRNIS RNYVTSRTPT 120 QVASHAQKYF IRLNSGGKDK RRSSIHDITT VNIPDDDHAS NTNPSPSPPS ALTATSSAPE 180 QFGALADSKP PPPLGGHHHF MPAHLYGSVK LEASNNGYHG DSALMQMHQC GQLQPLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 6e-66 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG041460.2 |