PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG038860.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 186aa MW: 20584.4 Da PI: 11.483 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 141.5 | 2.8e-44 | 36 | 134 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 +CaaCk+lrrkC++dCv+apyfp ++p+kf vh++FGasnv+kll++l++ +reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql+++ TRIDC1AG038860.4 36 PCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELNPYQREDAVNSLAYEADMRLRDPVYGCVGVISVLQHQLRQLQQD 128 7******************************************************************************************** PP DUF260 94 lallke 99 l++++ TRIDC1AG038860.4 129 LSRARY 134 *99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MASSSASSFP GSVITMASSA AAVGAASSGA AGTGSPCAAC KFLRRKCQPD CVFAPYFPPD 60 NPQKFVHVHR VFGASNVTKL LNELNPYQRE DAVNSLAYEA DMRLRDPVYG CVGVISVLQH 120 QLRQLQQDLS RARYELSKYQ SRRLRRWRSR RLWGATGRRQ WRISSATRCP TARRTSSTSA 180 TPRRSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65620.3 | 6e-52 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG038860.4 |