PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG038160.4
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 732aa    MW: 80668.9 Da    PI: 7.3328
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG038160.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP111.74.4e-3544119176
                       --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS
               SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 
                       +Cqv+gCead+ e+k yh+rh+vC  ++++++v+++g+++r+CqqC++fh l +fDe+krsCrr+L++hn+rrr+k
  TRIDC1AG038160.4  44 RCQVPGCEADIRELKGYHKRHRVCLRCAHSSAVMIDGVQKRYCQQCGKFHILLDFDEDKRSCRRKLERHNKRRRRK 119
                       6************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 732 aa     Download sequence    
AEALAGPRKK PRAASRGSSG AVVKTGGAGG GSGVAGRGGA AEMRCQVPGC EADIRELKGY  60
HKRHRVCLRC AHSSAVMIDG VQKRYCQQCG KFHILLDFDE DKRSCRRKLE RHNKRRRRKP  120
DSKGTLEKEI DEQLDLSADG SGSGEIREEN IDGASCDMLE TVLSNKVLDR ETPMGSEDAL  180
SSPTCTQLSL QNDRSKSIVT FAASAEACLG AKQENAKLTN SPVHDSKSAY SSSCPTGRIS  240
FKLYDWNPAE FPRRLRNQIF EWLSSMPVEL EGYIRPGCTI LTVFIAMPQH MWDKLSEDTA  300
NLVRNLVNAP SSLLLGKGAF FVHANNTIFQ VLKDGATLMS TRLEVQAPRI HCVHPTWFEA  360
GKPIELLLCG SSLDQPKFRS LLSFDGEYLK HDCCRLTSRE TFGCVKNGAS TFDSHHEVFR  420
INITQTKPDT HGPGFVEVEN VFGLSNFVPI LFCSKQLCFE LERIQDALCG SSKYKSANGE  480
FPGITSDPCE HWKLQQTAMS GFLIEIGWLI KKPSPDEFKK LLSKTNVERW ICVLEFLIQN  540
NFTNVLEMIV KSSDNIIGSE ILSNLESGRL EHHVTAFVGY IRHARIIVDQ RAKHNEETQL  600
QTRWCGDSVS DQPSLGTSVP LGKENVTDSD DFCLPSTNAE CEEEVSVPLV TNEAVSHRQC  660
RAPEMNARWL NPALVAPFPS GMMRTRLVAT VAVAAILCFT ACVAVFHPHR VGVLGAPVKS  720
SEPPGVSEGL IG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102120KRSCRRKLERHNKRRRRKP
2106118RRKLERHNKRRRR
3113120NKRRRRKP
4114119KRRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18830.11e-134SBP family protein