PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG036610.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 390aa    MW: 42615.9 Da    PI: 8.4348
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG036610.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.75.9e-1373129155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV++++++gr++A+++d  ++n+ ++k+   g ++ +e Aa+a++ a++k++g
  TRIDC1AG036610.1  73 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 129
                       57*******************6666777775555599******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MASPNPAAAD AAGLQKKMEA AAGGSEGPPP AYGAAVAEQA PPRRLAPARK ERVCTAKDRI  60
SRMTPCAAGK RSSIYRGVTR HRWTGRYEAH LWDKSTWNQN QNKKGKQGAY DDEEAAARAY  120
DLAALKYWGA GTQINFPVSD YTRDVEEMQM ISKEDYLVSL RRQLHNSRWD ASLGQLLGND  180
YMNLSCGKGI ALDGKFAGSF GLERKIDLTN YIRWWVPKKT RQSDTSKAEE VADEIRAIEG  240
SVQLTEAYKL PTLGLGSHSN PSSAGLSACS ILSQSGAFKS FLEKSTKLSE ECTFSKEIDE  300
GKVVVSVPTT GHHTSPVDIN MNGLLVQRAP YTLAPVMPTP MKSTWSPADP SADHLFWSNF  360
ILPSSQPVTM ATITTTTNEV SSSDPFKSQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.14e-85AP2 family protein