PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG033580.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 118aa MW: 12841.5 Da PI: 4.4668

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG033580.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	61.4	2.4e-19	5	61	44	100
DUF260 44 kllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 ++l++lp ++r da+sslvyeA+ar+rdPvyG+vg i+ lq+q++ql+ +la++++e TRIDC1AG033580.3 5 HYLQELPVQQRGDAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAQAE 61 6799*************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 118 aa Download sequence
HMRCHYLQEL PVQQRGDAVS SLVYEANARV RDPVYGCVGA ISFLQNQVSQ LQMQLAVAQA 60 EILCIQMQQR DGCQSQDDAG RSDGHSLAAM QQMVVDDTAA AEAFLMQNGG GGFPPQLM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	6e-36	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG033580.3