PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG033580.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 154aa    MW: 16915.4 Da    PI: 7.7572
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG033580.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260140.26.7e-4491081100
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                       +Ca+Ck+lrr+C+kdC++ap fpa++p+kfa+vhk+FGasnv+k+l +lp ++r da+sslvyeA+ar+rdPvyG+vg i+ lq+q++ql+ +
  TRIDC1AG033580.2   9 PCASCKLLRRRCTKDCIFAPFFPADDPHKFAIVHKVFGASNVSKMLLELPVQQRGDAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQ 101
                       7******************************************************************************************** PP

            DUF260  94 lallkee 100
                       la++++e
  TRIDC1AG033580.2 102 LAVAQAE 108
                       ***9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
VAFMAGGSPC ASCKLLRRRC TKDCIFAPFF PADDPHKFAI VHKVFGASNV SKMLLELPVQ  60
QRGDAVSSLV YEANARVRDP VYGCVGAISF LQNQVSQLQM QLAVAQAEIL CIQMQQRDGC  120
QSQDDAGRSD GHSLAAMQQM VGQQDHLKRE SLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.18e-73LBD family protein