PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG033140.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 314aa MW: 33259.4 Da PI: 9.4302

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG033140.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.8	4.4e-19	154	208	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Le+ F+++++++ ++++ LA++lgL rqV vWFqNrRa+ k TRIDC1AG033140.3 154 RKKLRLSKDQSAVLEDSFKEHSTLNPKQKAALARQLGLRPRQVEVWFQNRRARTK 208 788899***********************************************98 PP
2	HD-ZIP_I/II	130	9.7e-42	154	243	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q+++LE+sF+e+++L+p++K++lar+Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL++ev+eLr +l TRIDC1AG033140.3 154 RKKLRLSKDQSAVLEDSFKEHSTLNPKQKAALARQLGLRPRQVEVWFQNRRARTKLKQTEVDCESLKRCCETLTEENRRLQREVQELR-AL 243 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
LGLGLGLGLS LGMSGTTSPV EPAAPQRALT AAAPSTLGRQ QQQSWNGAGL FYPASSGEQP 60 RSHADDRRLA ALACHEMPSL RGIDVNRAPA TGGARGSCGA SEDEEPGASS PDSTLSSLSG 120 KRGAPTRSGG GEQERAGAGS DDEDDSGTGG AGSRKKLRLS KDQSAVLEDS FKEHSTLNPK 180 QKAALARQLG LRPRQVEVWF QNRRARTKLK QTEVDCESLK RCCETLTEEN RRLQREVQEL 240 RALKLLAPPA PHLYMRAPPP TTLTMCPSCE RVAPSGKPAV DESRAAMVTR AVPTGPWGPV 300 PVMPVFLGRP AQRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	153	159	SRKKLRL
2	203	211	RRARTKLKQ
3	217	222	ESLKRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	1e-60	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG033140.3