PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG033140.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 249aa MW: 27036.5 Da PI: 8.2827 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.3 | 3e-19 | 81 | 135 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Le+ F+++++++ ++++ LA++lgL rqV vWFqNrRa+ k TRIDC1AG033140.2 81 RKKLRLSKDQSAVLEDSFKEHSTLNPKQKAALARQLGLRPRQVEVWFQNRRARTK 135 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 130.6 | 6.1e-42 | 81 | 170 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q+++LE+sF+e+++L+p++K++lar+Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL++ev+eLr +l TRIDC1AG033140.2 81 RKKLRLSKDQSAVLEDSFKEHSTLNPKQKAALARQLGLRPRQVEVWFQNRRARTKLKQTEVDCESLKRCCETLTEENRRLQREVQELR-AL 170 69*************************************************************************************9.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
CHEMPSLRGI DVNRAPATGG ARGSCGASED EEPGASSPDS TLSSLSGKRG APTRSGGGEQ 60 ERAGAGSDDE DDSGTGGAGS RKKLRLSKDQ SAVLEDSFKE HSTLNPKQKA ALARQLGLRP 120 RQVEVWFQNR RARTKLKQTE VDCESLKRCC ETLTEENRRL QREVQELRAL KLLAPPAPHL 180 YMRAPPPTTL TMCPSCERVA PSGKPAVDES RAAMVTRAVP TGPWGPVPVM PVFLGSWELT 240 IQWPYLMEY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 80 | 86 | SRKKLRL |
2 | 130 | 138 | RRARTKLKQ |
3 | 144 | 149 | ESLKRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16780.1 | 5e-61 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG033140.2 |