PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG032640.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 319aa MW: 33833.2 Da PI: 10.1193

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG032640.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	69.8	5.2e-22	60	149	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt++e+laLiea+r+++e+l++g+l++++W+ev+ ++ + +s +qC++k+e+l+kry+++++++ +r+++ ++p+f l+ TRIDC1AG032640.2 60 CWTHEETLALIEAYRDKWEALKKGNLRAADWDEVAGAVtarcgrFPTATYKSGVQCRHKIEKLRKRYRAERTRSMGRSKG--PKWPFFPLLH 149 8***********************************9988877778899********************98443..47**9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence
MSSSSSLKQD DVPSSPELPP LAAPGIAAAA AAAAAAASSG GGGGGVGAGG GSGRRLPPPC 60 WTHEETLALI EAYRDKWEAL KKGNLRAADW DEVAGAVTAR CGRFPTATYK SGVQCRHKIE 120 KLRKRYRAER TRSMGRSKGP KWPFFPLLHD LAGGGVPDAS PNPIIKIKPR GNATPASPSP 180 VSSPSSEDAG RSRSLHGLIS NGGGGSGLRF TIPKASRTKP GVPREARPDR DRGDDDPEAE 240 AMAEVASALR AVGEGFLRME ERRLELSLQM EKERMESEMK RTQALLDAQQ VFVEAFLGKQ 300 QPHHKKAKLV SSAAAMEED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	4e-28	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG032640.2