PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG030500.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 104aa MW: 11871.7 Da PI: 10.0252 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.3 | 1.7e-13 | 4 | 52 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ eEd+ll++ + ++G g +W + a+t+g+ R++ c+ rw++yl TRIDC1AG030500.1 4 KGKWSREEDDLLKKHIDKYGIGrSWQALAETLGLQRCGRGCRARWLNYL 52 79******************999*************************7 PP | |||||||
2 | Myb_DNA-binding | 34.2 | 5.7e-11 | 59 | 100 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 g++T+ E+ ++ + + G+ W+ Ia+ ++ gRt+ +k++w+ TRIDC1AG030500.1 59 GNFTPAEESIICEMYSKRGSC-WSVIAAQLP-GRTDLAVKNYWN 100 89*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 104 aa Download sequence |
MVKKGKWSRE EDDLLKKHID KYGIGRSWQA LAETLGLQRC GRGCRARWLN YLRPGLKHGN 60 FTPAEESIIC EMYSKRGSCW SVIAAQLPGR TDLAVKNYWN GTIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37780.1 | 1e-42 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG030500.1 |