PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG029960.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 161aa MW: 17567.3 Da PI: 7.9589 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.6 | 9.3e-32 | 2 | 60 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp++++itY+++Hnh+ TRIDC1AG029960.2 2 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRTDPNMLVITYTSDHNHP 60 699************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
PSDLWAWRKY GQKPIKGSPY PRGYYRCSSS KGCPARKQVE RSRTDPNMLV ITYTSDHNHP 60 WPTQRNALAG STRPSSSSAA AAKIAASSSS SLAAAAARNS SNTNVDVDCA GAHHQLKQES 120 DLDLFADMDA LSVFSSIDKI QEDDSKQQLF DPFSSGFCDY I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34830.1 | 4e-47 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG029960.2 |