PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG029320.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 827aa MW: 89553.8 Da PI: 5.9255 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.8 | 1.2e-20 | 82 | 137 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++++e+lF+++++p+ ++r +L+++lgL+ rqVk+WFqNrR+++k TRIDC1AG029320.5 82 KKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMK 137 688999***********************************************998 PP | |||||||
2 | START | 126.7 | 2.8e-40 | 300 | 544 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE.EXCCTTEEEEEEESSS...................SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-T CS START 1 elaeeaaqelvkkalaeepgWvkss.esengdevlqkfeeskv..................dsgealrasgvvdmvlallveellddkeqWde 74 ela +aa+ l+k+ +ep+W + + +++ + ev+ +e ++ ++e r+s+vv+m++ +lv +ld + +W e TRIDC1AG029320.5 300 ELASTAADHLIKMCRTSEPLWARRRgTGPSSGEVMDAEEHARMlswpidsgkqqqsdvahsARTEGTRDSAVVIMNSITLVDAFLDAN-KWME 391 578999********************9999999999998888899999999999****99999*************************.**** PP T-S....EEEEEEEECTT........EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--......-TTSEE-EES CS START 75 tla....kaetlevissg........galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppe.....sssvvRaell 148 ++ ka t++vi g g l lm+ae+q+lsplvp R++vf Ry+ +g+w ivd d q+ +ss+vR++++ TRIDC1AG029320.5 392 LFPsivcKARTIQVIHHGaasghlssGSLILMQAEMQFLSPLVPaREVVFFRYCVHnADEGTWSIVDFPADGFQEELLqqqqqTSSLVRCRRR 484 ********************************************************9999*******88775444322333459********* PP SEEEEEEEECTCEEEEEEEE-EE--SSXX..HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 149 pSgiliepksnghskvtwvehvdlkgrlp..hwllrslvksglaegaktwvatlqrqcek 206 pSg++i++ +ng+s+v wveh+++ g + +++ v g+a+ga +wv+ lqrqce+ TRIDC1AG029320.5 485 PSGCIIQDAPNGYSRVLWVEHMEVVGEEKplQPVFKDHVAGGAAFGATRWVSVLQRQCER 544 ***********************98876549***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 827 aa Download sequence |
FQKEEGVMGG LHLAKDEELD LDMEMELSGG SGSGHLDGLL SFADVDDDRD QKPQHSEPDG 60 AGAGHHPSSS AAAAASNGNG KKKRYHRHTA HQIQQMEALF KECPHPDDKQ RLKLSQELGL 120 KPRQVKFWFQ NRRTQMKAQQ DRADNVILRA ENESLKTDNY RLQAAIRNVV CPSCGHAAVI 180 GDMSYEEQNL RIENARLKDE LDRLACIASR YGGGRQPGMS SASALSCMSA PPPVLMPPLD 240 LDMNVYSRHF AEQQHGAMDL MALPQQMAAG GHGIAATASY LQGPMTPVIV QEQDKQLVME 300 LASTAADHLI KMCRTSEPLW ARRRGTGPSS GEVMDAEEHA RMLSWPIDSG KQQQSDVAHS 360 ARTEGTRDSA VVIMNSITLV DAFLDANKWM ELFPSIVCKA RTIQVIHHGA ASGHLSSGSL 420 ILMQAEMQFL SPLVPAREVV FFRYCVHNAD EGTWSIVDFP ADGFQEELLQ QQQQTSSLVR 480 CRRRPSGCII QDAPNGYSRV LWVEHMEVVG EEKPLQPVFK DHVAGGAAFG ATRWVSVLQR 540 QCERLASELA RSIADQGVIR TPEARTNMMK LSQRMVTAFC ANISASGSQS WTALSDSTED 600 TVRITTRKNT EPGQPSGVIL TAVSTSWLPF SHQQVFELLA DEQQRCQLEI LSNGGSLHEV 660 AHIANGSHPR NCISLLRINS ASNSSQNVEL LLQESSIHPD GGSLVVFATV DVDAIQVTMS 720 GEDPSYIPLL PMGFAIFPAT SPSPGATSSD TTSNGESSPG NADEPATGCL LTVGMQVLAS 780 AVPSAKLNLS SVTAINSHIC NTIHQITTAL KGAGGSRTEP APAGSDQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G46880.1 | 0.0 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG029320.5 |