PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG029320.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 734aa MW: 80630.3 Da PI: 6.4777 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65 | 1.1e-20 | 138 | 193 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++++e+lF+++++p+ ++r +L+++lgL+ rqVk+WFqNrR+++k TRIDC1AG029320.1 138 KKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMK 193 688999***********************************************998 PP | |||||||
2 | START | 128.7 | 7.2e-41 | 356 | 600 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE.EXCCTTEEEEEEESSS...................SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-T CS START 1 elaeeaaqelvkkalaeepgWvkss.esengdevlqkfeeskv..................dsgealrasgvvdmvlallveellddkeqWde 74 ela +aa+ l+k+ +ep+W + + +++ + ev+ +e ++ ++e r+s+vv+m++ +lv +ld + +W e TRIDC1AG029320.1 356 ELASTAADHLIKMCRTSEPLWARRRgTGPSSGEVMDAEEHARMlswpidsgkqqqsdvahsARTEGTRDSAVVIMNSITLVDAFLDAN-KWME 447 578999********************9999999999998888899999999999****99999*************************.**** PP T-S....EEEEEEEECTT........EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--......-TTSEE-EES CS START 75 tla....kaetlevissg........galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppe.....sssvvRaell 148 ++ ka t++vi g g l lm+ae+q+lsplvp R++vf Ry+ +g+w ivd d q+ +ss+vR++++ TRIDC1AG029320.1 448 LFPsivcKARTIQVIHHGaasghlssGSLILMQAEMQFLSPLVPaREVVFFRYCVHnADEGTWSIVDFPADGFQEELLqqqqqTSSLVRCRRR 540 ********************************************************9999*******88775444322333459********* PP SEEEEEEEECTCEEEEEEEE-EE--SSXX..HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 149 pSgiliepksnghskvtwvehvdlkgrlp..hwllrslvksglaegaktwvatlqrqcek 206 pSg++i++ +ng+s+v+wveh+++ g + +++ v g+a+ga +wv+ lqrqce+ TRIDC1AG029320.1 541 PSGCIIQDAPNGYSRVVWVEHMEVVGEEKplQPVFKDHVAGGAAFGATRWVSVLQRQCER 600 ***********************98876549***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 734 aa Download sequence |
MFGDCQVLSS MAAMAAGGSS ADALFASPLM PNPGALAGFM SNSSAMPFHH HFSTNLIPKE 60 EGVMGGLHLA KDEELDLDME MELSGGSGSG HLDGLLSFAD VDDDRDQKPQ HSEPDGAGAG 120 HHPSSSAAAA ASNGNGKKKR YHRHTAHQIQ QMEALFKECP HPDDKQRLKL SQELGLKPRQ 180 VKFWFQNRRT QMKAQQDRAD NVILRAENES LKTDNYRLQA AIRNVVCPSC GHAAVIGDMS 240 YEEQNLRIEN ARLKDELDRL ACIASRYGGG RQPGMSSASA LSCMSAPPPV LMPPLDLDMN 300 VYSRHFAEQQ HGAMDLMALP QQMAAGGHGI AATASYLQGP MTPVIVQEQD KQLVMELAST 360 AADHLIKMCR TSEPLWARRR GTGPSSGEVM DAEEHARMLS WPIDSGKQQQ SDVAHSARTE 420 GTRDSAVVIM NSITLVDAFL DANKWMELFP SIVCKARTIQ VIHHGAASGH LSSGSLILMQ 480 AEMQFLSPLV PAREVVFFRY CVHNADEGTW SIVDFPADGF QEELLQQQQQ TSSLVRCRRR 540 PSGCIIQDAP NGYSRVVWVE HMEVVGEEKP LQPVFKDHVA GGAAFGATRW VSVLQRQCER 600 LASELARSIA DQGVIRTPEA RTNMMKLSQR MVTAFCANIS ASGSQSWTAL SDSTEDTVRI 660 TTRKNTEPGQ PSGVILTAVS TSWLPFSHQQ VFELLADEQQ RCQSLRFCQT GAHFMRWHIL 720 QMDHTQGIAF LFFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G46880.1 | 0.0 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG029320.1 |