PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG028460.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 197aa    MW: 21189.7 Da    PI: 4.7916
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG028460.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.4e-182474156
               AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56
                      + y+GVr++   g+Wv+eIr+       + +r++lg++ t+e+Aa+a++aa+++l+g+
  TRIDC1AG028460.1 24 PVYRGVRFR--AGKWVSEIRElR-----KhTRIWLGTYPTPEMAAAAYDAAALALRGA 74
                      68*****96..5*********55.....35*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MEQGREGMMG SLCGRRPRAE TRHPVYRGVR FRAGKWVSEI RELRKHTRIW LGTYPTPEMA  60
AAAYDAAALA LRGAGTALNF PDAARSRPAP ASMSADDVRA AAAAAAASAM ASTWAPQRSD  120
QCYGDQLHAG EQDRRDDAIG VVDEDDVFEM PRLMVSMAEG LMISPPVLGT PAADGCSAAS  180
YYAEAEDEDA VSLWDHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-18ERF family protein