PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG026970.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 569aa MW: 60622.7 Da PI: 5.3027

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG026970.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	109.6	1.9e-34	252	337	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r++++ r++++ k+plWee+s+ mr+ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+qlea TRIDC1AG026970.7 252 RWPKAEVHALIQLRSNLDMRYQEAGPKGPLWEEISAGMRRMGYNRSSKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLEA 337 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
AATAGLPTPV VVGNLSFSTS NTEEYSDEDD SDDEGTDDMG GGADERGKRK RTSEGGAAAG 60 SGGEAGSGKM MRFFEGLMKQ VMERQEAMQQ RFLEAIEKRE QDRMIREEAW RRQEMARLAR 120 EQEILGQERA MAATRDAAVL SFIQKITGQT IPMPSIAAQA ITFMPPPPPS QPHATPSPPQ 180 PQPSPRQQKP PTMPPVTPQP HKSPAPATPQ LQQQAPAVNS SCMDIVVAPS EAPHDSSGYD 240 GSGGGSGPTS SRWPKAEVHA LIQLRSNLDM RYQEAGPKGP LWEEISAGMR RMGYNRSSKR 300 CKEKWENINK YFKKVKESNK KRPEDSKTCP YFHQLEALYR NKAALGSPSG AGGALALPPP 360 AVHANAAPQE RIEAFTVAAP ISQTAPQQPP VAKNDASNAG NGNGNGGGAS AGVSGGAQRL 420 AASNGGSRFV FGEAGGDAAA KKPEGIMKET TMEQRQPQPQ PQAAQQAAIN SYNRTGGGGA 480 ESDNMDEDDE DEDDYEDEDE EDDLDGNKTQ YKIQFQGQQQ HQNQHQQHHH NVVRPNATSS 540 GGGNPPGAAA PSAPAAATTT AGSFLGMVQ

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

AATAGLPTPV VVGNLSFSTS NTEEYSDEDD SDDEGTDDMG GGADERGKRK RTSEGGAAAG  60
SGGEAGSGKM MRFFEGLMKQ VMERQEAMQQ RFLEAIEKRE QDRMIREEAW RRQEMARLAR  120
EQEILGQERA MAATRDAAVL SFIQKITGQT IPMPSIAAQA ITFMPPPPPS QPHATPSPPQ  180
PQPSPRQQKP PTMPPVTPQP HKSPAPATPQ LQQQAPAVNS SCMDIVVAPS EAPHDSSGYD  240
GSGGGSGPTS SRWPKAEVHA LIQLRSNLDM RYQEAGPKGP LWEEISAGMR RMGYNRSSKR  300
CKEKWENINK YFKKVKESNK KRPEDSKTCP YFHQLEALYR NKAALGSPSG AGGALALPPP  360
AVHANAAPQE RIEAFTVAAP ISQTAPQQPP VAKNDASNAG NGNGNGGGAS AGVSGGAQRL  420
AASNGGSRFV FGEAGGDAAA KKPEGIMKET TMEQRQPQPQ PQAAQQAAIN SYNRTGGGGA  480
ESDNMDEDDE DEDDYEDEDE EDDLDGNKTQ YKIQFQGQQQ HQNQHQQHHH NVVRPNATSS  540
GGGNPPGAAA PSAPAAATTT AGSFLGMVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	2e-50	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG026970.7