PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG026970.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 404aa MW: 43566 Da PI: 8.2053

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG026970.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	99.5	2.8e-31	77	161	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r++ lk+plWeevs+k++e+g++r++k+Ckek+en++k+yk++k+++ +r ++ +t+++f+qlea TRIDC1AG026970.6 77 RWPRQETLALLKIRSDMDAAFRDATLKGPLWEEVSRKLAEEGYRRNAKKCKEKFENVHKYYKRTKDSRAGR--NDGKTYRFFRQLEA 161 8******************************************************************97..56668*****85 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
LHPPEMPPFS PSRSTGQQRI SMAEAPSPIS SRPPAPGPPT PQQQLNNELA GAGPVGFDEE 60 ALAAGEEGLG GGAGGNRWPR QETLALLKIR SDMDAAFRDA TLKGPLWEEV SRKLAEEGYR 120 RNAKKCKEKF ENVHKYYKRT KDSRAGRNDG KTYRFFRQLE AMQSTSSVTA APMASAPPPA 180 TAVGVPGVVG PTALRPLAEP PPVGAAAAAT AGLPTPVVVG NLSFSTSNTE EYSDEDDSDD 240 EGTDDMGGGA DERGKRKRTS EGGAAAGSGG EAGSGKMMRF FEGLMKQVME RQEAMQQRFL 300 EAIEKREQDR MIREEAWRRQ EMARLAREQE ILGQERAMAA TRDAAVLSFI QKITGQTIPM 360 PSIAAQAITF MPPPPPSQPH ATPIAYSAAP VHPRPPRSRQ QCRP

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

LHPPEMPPFS PSRSTGQQRI SMAEAPSPIS SRPPAPGPPT PQQQLNNELA GAGPVGFDEE  60
ALAAGEEGLG GGAGGNRWPR QETLALLKIR SDMDAAFRDA TLKGPLWEEV SRKLAEEGYR  120
RNAKKCKEKF ENVHKYYKRT KDSRAGRNDG KTYRFFRQLE AMQSTSSVTA APMASAPPPA  180
TAVGVPGVVG PTALRPLAEP PPVGAAAAAT AGLPTPVVVG NLSFSTSNTE EYSDEDDSDD  240
EGTDDMGGGA DERGKRKRTS EGGAAAGSGG EAGSGKMMRF FEGLMKQVME RQEAMQQRFL  300
EAIEKREQDR MIREEAWRRQ EMARLAREQE ILGQERAMAA TRDAAVLSFI QKITGQTIPM  360
PSIAAQAITF MPPPPPSQPH ATPIAYSAAP VHPRPPRSRQ QCRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	3e-43	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG026970.6