PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG026970.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 817aa MW: 86981.3 Da PI: 6.5268

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG026970.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	98	8.1e-31	97	181	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r++ lk+plWeevs+k++e+g++r++k+Ckek+en++k+yk++k+++ +r ++ +t+++f+qlea TRIDC1AG026970.4 97 RWPRQETLALLKIRSDMDAAFRDATLKGPLWEEVSRKLAEEGYRRNAKKCKEKFENVHKYYKRTKDSRAGR--NDGKTYRFFRQLEA 181 8******************************************************************97..56668*****85 PP
2	trihelix	108.9	3.2e-34	500	585	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r++++ r++++ k+plWee+s+ mr+ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+qlea TRIDC1AG026970.4 500 RWPKAEVHALIQLRSNLDMRYQEAGPKGPLWEEISAGMRRMGYNRSSKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLEA 585 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 817 aa Download sequence
MQQQQQQPQH QGGGPGQQFG LHPPEMPPFS PSRSTGQQRI SMAEAPSPIS SRPPAPGPPT 60 PQQQLNNELA GAGPVGFDEE ALAAGEEGLG GGAGGNRWPR QETLALLKIR SDMDAAFRDA 120 TLKGPLWEEV SRKLAEEGYR RNAKKCKEKF ENVHKYYKRT KDSRAGRNDG KTYRFFRQLE 180 AMQSTSSVTA APMASAPPPA TAVGVPGVVG PTALRPLAEP PPVGAAAAAT AGLPTPVVVG 240 NLSFSTSNTE EYSDEDDSDD EGTDDMGGGA DERGKRKRTS EGGAAAGSGG EAGSGKMMRF 300 FEGLMKQVME RQEAMQQRFL EAIEKREQDR MIREEAWRRQ EMARLAREQE ILGQERAMAA 360 TRDAAVLSFI QKITGQTIPM PSIAAQAITF MPPPPPSQPH ATPIAYSAAP VHPRPPSSQP 420 PATHSPPQPQ PSPRQQKPPT MPPVTPQPHK SPAPATPQLQ QQAPAVNSSC MDIVVAPSEA 480 PHDSSGYDGS GGGSGPTSSR WPKAEVHALI QLRSNLDMRY QEAGPKGPLW EEISAGMRRM 540 GYNRSSKRCK EKWENINKYF KKVKESNKKR PEDSKTCPYF HQLEALYRNK AALGSPSGAG 600 GALALPPPAV HANAAPQERI EAFTVAAPIS QTAPQQPPVA KNDASNAGNG NGNGGGASAG 660 VSGGAQRLAA SNGGSRFVFG EAGGDAAAKK PEGIMKETTM EQRQPQPQPQ AAQQAAINSY 720 NRTGGGGAES DNMDEDDEDE DDYEDEDEED DLDGNKTQYK IQFQGQQQHQ NQHQQHHHNV 780 VRPNATSSGG GNPPGAAAPS APAAATTTAG SFLGMVQ

Sequence ? help Back to Top

Protein Sequence Length: 817 aa Download sequence

MQQQQQQPQH QGGGPGQQFG LHPPEMPPFS PSRSTGQQRI SMAEAPSPIS SRPPAPGPPT  60
PQQQLNNELA GAGPVGFDEE ALAAGEEGLG GGAGGNRWPR QETLALLKIR SDMDAAFRDA  120
TLKGPLWEEV SRKLAEEGYR RNAKKCKEKF ENVHKYYKRT KDSRAGRNDG KTYRFFRQLE  180
AMQSTSSVTA APMASAPPPA TAVGVPGVVG PTALRPLAEP PPVGAAAAAT AGLPTPVVVG  240
NLSFSTSNTE EYSDEDDSDD EGTDDMGGGA DERGKRKRTS EGGAAAGSGG EAGSGKMMRF  300
FEGLMKQVME RQEAMQQRFL EAIEKREQDR MIREEAWRRQ EMARLAREQE ILGQERAMAA  360
TRDAAVLSFI QKITGQTIPM PSIAAQAITF MPPPPPSQPH ATPIAYSAAP VHPRPPSSQP  420
PATHSPPQPQ PSPRQQKPPT MPPVTPQPHK SPAPATPQLQ QQAPAVNSSC MDIVVAPSEA  480
PHDSSGYDGS GGGSGPTSSR WPKAEVHALI QLRSNLDMRY QEAGPKGPLW EEISAGMRRM  540
GYNRSSKRCK EKWENINKYF KKVKESNKKR PEDSKTCPYF HQLEALYRNK AALGSPSGAG  600
GALALPPPAV HANAAPQERI EAFTVAAPIS QTAPQQPPVA KNDASNAGNG NGNGGGASAG  660
VSGGAQRLAA SNGGSRFVFG EAGGDAAAKK PEGIMKETTM EQRQPQPQPQ AAQQAAINSY  720
NRTGGGGAES DNMDEDDEDE DDYEDEDEED DLDGNKTQYK IQFQGQQQHQ NQHQQHHHNV  780
VRPNATSSGG GNPPGAAAPS APAAATTTAG SFLGMVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	2e-48	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG026970.4