PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG026970.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 640aa    MW: 68721 Da    PI: 10.5944
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG026970.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix98.55.8e-31102186187
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                       rW++qe+laL+++r++m+ ++r++ lk+plWeevs+k++e+g++r++k+Ckek+en++k+yk++k+++ +r  ++ +t+++f+qlea
  TRIDC1AG026970.3 102 RWPRQETLALLKIRSDMDAAFRDATLKGPLWEEVSRKLAEEGYRRNAKKCKEKFENVHKYYKRTKDSRAGR--NDGKTYRFFRQLEA 186
                       8********************************************************************97..56668*******85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 640 aa     Download sequence    
PVCTSMQQQQ QQPQHQGGGP GQQFGLHPPE MPPFSPSRST GQQRISMAEA PSPISSRPPA  60
PGPPTPQQQL NNELAGAGPV GFDEEALAAG EEGLGGGAGG NRWPRQETLA LLKIRSDMDA  120
AFRDATLKGP LWEEVSRKLA EEGYRRNAKK CKEKFENVHK YYKRTKDSRA GRNDGKTYRF  180
FRQLEAMQST SSVTAAPMAS APPPATAVGV PGVVGPTALR PLAEPPPVGA AAAATAGLPT  240
PVVVGNLSFS TSNTEEYSDE DDSDDEGTDD MGGGADERGK RKRTSEGGAA AGSGGEAGSG  300
KMMRFFEGLM KQVMERQEAM QQRFLEAIEK REQDRMIREE AWRRQEMARL AREQEILGQE  360
RAMAATRDAA VLSFIQKITG QTIPMPSIAA QAITFMPPPP PSQPHATPIA YSAAPVHPRP  420
PSSQPPATHS PPQPQPSPRQ QKPPTIATAA SAGRKFKLHG HRRGALGSAA RLVGLRRVRW  480
RQRTDIVAVA QGGGARADPT AEQPGHEVPR GRAQGTALGR DLRRHAADGL QPELQAVQGE  540
VGEHQQVLQE GEGEQQEAAR GLQDVPLLPP ARGALPQQGG ARLPLRRRRR TGFAAARSAR  600
QCSSPGAHRG VHRRGADLAD GSAAATCGQE RRQQRRERQR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1586591RRRRRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.12e-41Trihelix family protein