PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG026970.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 596aa    MW: 62287.5 Da    PI: 10.0932
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG026970.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix98.65.2e-3197181187
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                       rW++qe+laL+++r++m+ ++r++ lk+plWeevs+k++e+g++r++k+Ckek+en++k+yk++k+++ +r  ++ +t+++f+qlea
  TRIDC1AG026970.1  97 RWPRQETLALLKIRSDMDAAFRDATLKGPLWEEVSRKLAEEGYRRNAKKCKEKFENVHKYYKRTKDSRAGR--NDGKTYRFFRQLEA 181
                       8********************************************************************97..56668*******85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 596 aa     Download sequence    
MQQQQQQPQH QGGGPGQQFG LHPPEMPPFS PSRSTGQQRI SMAEAPSPIS SRPPAPGPPT  60
PQQQLNNELA GAGPVGFDEE ALAAGEEGLG GGAGGNRWPR QETLALLKIR SDMDAAFRDA  120
TLKGPLWEEV SRKLAEEGYR RNAKKCKEKF ENVHKYYKRT KDSRAGRNDG KTYRFFRQLE  180
AMQSTSSVTA APMASAPPPA TAVGVPGAAA ATAGLPTPVV VGNLSFSTSN TEEYSDEDDS  240
DDEGTDDMGG GADERGKRKR TSEGGAAAGS GDGASGGDAA AVPGGHREAG AGPHDPRGGV  300
AEAGDGAPGA RAGDPRAGAR HGCYPRRRCA LLHTEDHRAD HPHAVHRRTG HYIHATAAAF  360
AASPTCHALA ASTSTLATAA EAANNAARDA AAAQVAGSSD ATATAASAGR KFKLHGHRRG  420
ALGSAARLVG LRRVRWRQRT DIVAVAQGGG ARADPTAEQP GHEVPRGRAQ GTALGRDLRR  480
HAADGLQPEL QAVQGEVGEH QQVLQEGEGE QQEAARGLQD VPLLPPARGA LPQQGGARLP  540
LRRRRRTGFA AARSARQCSS PGAHRGVHRR GADLADGSAA ATCGQERRQQ RRERQR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1542547RRRRRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.13e-41Trihelix family protein