PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG026930.4
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 273aa    MW: 28898.6 Da    PI: 8.5104
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG026930.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY80.74.3e-253794461
             YABBY  4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaes 61
                         seq+Cyv+C fC+t+l+vsvPs+slfk+vtvrCGhC+sll+v+++     ++++ 
  TRIDC1AG026930.4 37 EAPSEQLCYVHCHFCDTVLVVSVPSSSLFKTVTVRCGHCSSLLTVDMRGLLFPTTTTT 94
                      5689******************************************998775554444 PP

2YABBY133.62.4e-41190253108170
             YABBY 108 evprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                        +pr+ p v+rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl
  TRIDC1AG026930.4 190 PSPRTNPvVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 253
                       567877769*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
SSSGASAAFT PVSQQQQQMA SESLSSELQP PAPMQPEAPS EQLCYVHCHF CDTVLVVSVP  60
SSSLFKTVTV RCGHCSSLLT VDMRGLLFPT TTTTVAAESA ASAVTTTTSP PPAAAAHHGQ  120
FHYPSSLNLA PGNPPRHSLL DEISSANPSL QLLEQHGLGG LIAAAGGRNA AAPAPLPPPP  180
VAGGKGGKEP SPRTNPVVNR PPEKRQRVPS AYNRFIKDEI QRIKAGNPDI SHREAFSAAA  240
KNWAHFPHIH FGLMPDHQGL RKTSLLPQDY KLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.11e-39YABBY family protein