PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG025810.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 204aa MW: 22303.2 Da PI: 9.9685 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.4 | 1.9e-14 | 3 | 51 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd l+++ ++++G g +W ++t+g++R++ +c+srw++yl TRIDC1AG025810.1 3 KGKWSKEEDNLIKNHIEKYGIGcSWQGLSNTLGLRRCGRSCRSRWLNYL 51 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 38.2 | 3.2e-12 | 58 | 101 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g++T+ Ed ++ + ++ G+ W+ Ia++++ gRt+ +k++w++ TRIDC1AG025810.1 58 GNFTPAEDRIICEMYRKKGSC-WSVIAAELP-GRTDLAIKNYWNST 101 89*******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MKKGKWSKEE DNLIKNHIEK YGIGCSWQGL SNTLGLRRCG RSCRSRWLNY LRPGLKHGNF 60 TPAEDRIICE MYRKKGSCWS VIAAELPGRT DLAIKNYWNS TLKKQLPRKA RSRRRRRTGG 120 TSSSCDATSL DLALVVYDEE STSGTARDLP LVVCNEDDSA TATTAGHLPL LAYNVNEASS 180 TAGSSSSHAG AVSAGSPVQA RAQP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 113 | 118 | RRRRRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37780.1 | 2e-33 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG025810.1 |