PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG023900.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 577aa    MW: 62865.8 Da    PI: 8.5366
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG023900.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.75.4e-2410111199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f k+lt+sd+++ g +++p+ +ae++         ++ +  t+  +d +g++W++++iyr++++r++lt+GW+ Fv++++L +gD++vF   +
  TRIDC1AG023900.1  10 FAKTLTQSDANNGGGFSVPRYCAETIfpkldyrADPPVQ--TVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL--R 98 
                       89****************************996555555..8999*********************************************..5 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       ++ +el+v+++r+
  TRIDC1AG023900.1  99 TEHGELCVGIRRA 111
                       5999*******97 PP
2Auxin_resp1193.8e-39167250183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                       aa+ a+++++FevvY+Prast+eFvvk++ +++a+++++++GmRfkmafetedss++++ +Gt+++v+ +dp+rWpnS+Wr+L+
  TRIDC1AG023900.1 167 AATLAANSQPFEVVYYPRASTPEFVVKAAAMQAAMRIHWCPGMRFKMAFETEDSSRISWfMGTISSVQVADPLRWPNSPWRLLQ 250
                       68899*****************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    
AEAREKLASF AKTLTQSDAN NGGGFSVPRY CAETIFPKLD YRADPPVQTV LAKDVHGEVW  60
KFRHIYRGTP RRHLLTTGWS TFVNQKKLVA GDSIVFLRTE HGELCVGIRR AKRVTCGGME  120
CISGWNAPGY GGFSAFLKDE ENKMMNAGPA GYVKGRGKVK IADVVEAATL AANSQPFEVV  180
YYPRASTPEF VVKAAAMQAA MRIHWCPGMR FKMAFETEDS SRISWFMGTI SSVQVADPLR  240
WPNSPWRLLQ VTWDEPDLLQ NVKCVSPWLV ELVSSIPPIH LGPFSPPRKK LRVPQHPDFP  300
LDGHLFNPIF HGNPLGPSNS PLCCYSDKNS PAGIQGARHA QFGLPLTDHQ LNKLHLGLFH  360
GGGFNRLDAL TPSSRISKGF VLSSAPAHDS VSCLLTIGTP QSTEKSVDRK TPHIMLFGKA  420
ILTEQQMTSS GSRETLSSGA TGNSSPISTA LKAGNASDGS GSSICIGFSS QGHEASDLGL  480
EAGHCKVFME SEDVGRTIDL SVFGSYDELY GRLADMFGIE KEEIISHLRY RDTAGAVMHT  540
GGLPFSDFMK VARRLTIISG EKGGLAKPLI ECMVQRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.10.0ARF family protein