PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC1AG021290.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 123aa MW: 13070.3 Da PI: 5.9603 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.3 | 4.6e-19 | 11 | 62 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr ++ +g+++AeIrdp + +r++lg+f+taeeAa+ +++a+ + +g TRIDC1AG021290.4 11 TKYRGVRTRP-WGKFAAEIRDPERG--GARVWLGTFDTAEEAARVYDRAAFAQRG 62 69*****999.**********8333..4***********************9998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 123 aa Download sequence |
SHRAMEDDKK TKYRGVRTRP WGKFAAEIRD PERGGARVWL GTFDTAEEAA RVYDRAAFAQ 60 RGATAVLNFP GEAGGATGSS SSAPAGSGAG TGRGRGGTEK IELEYLDDSL LDELLDDSKY 120 GGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23230.1 | 5e-31 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC1AG021290.4 |