PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG021290.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 136aa MW: 14565.9 Da PI: 4.6962 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60 | 5.7e-19 | 13 | 64 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr ++ +g+++AeIrdp + +r++lg+f+taeeAa+ +++a+ + +g TRIDC1AG021290.2 13 TKYRGVRTRP-WGKFAAEIRDPERG--GARVWLGTFDTAEEAARVYDRAAFAQRG 64 69*****999.**********8333..4***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence |
SPSHRAMEDD KKTKYRGVRT RPWGKFAAEI RDPERGGARV WLGTFDTAEE AARVYDRAAF 60 AQRGATAVLN FPGEAGGATG SSSSAPAGSG AGTGRGRGGT EKIELEYLDD SLLDELLDDS 120 KYEEMASTNT YVNVDV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 3e-31 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG021290.2 |